Structure Alignment Results.  help
Query: pdb entry 4kdz:A , 156 residues

CRYSTAL STRUCTURE OF TRNA/RRNA METHYLTRANSFERASE YIBK FROM ESCHERICHIA COLI (TARGET NYSGRC-012599)

Examined 96131 entries, (248204 chains).  Displaying Matches 1-20 of 33.
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 ##   Scoring  help RMSD Nalign Ng %seq Query Target (PDB entry)
Q P Z %sse Match %sse Nres × Title
1 1.00 45.6 20.3 0.00 156 0 100 100 4kdz:A 100 156 CRYSTAL STRUCTURE OF TRNA/RRNA METHYLTRANSFERASE YIBK FROM ESCHERICHIA COLI (TARGET NYSGRC-012599)
2 0.97 33.0 17.2 0.33 154 0 99 100 4jak:B 100 155 CRYSTAL STRUCTURE OF TRNA (UM34/CM34) METHYLTRANSFERASE TRML FROM ESCHERICHIA COLI
3 0.97 33.0 17.2 0.33 154 0 99 100 4jak:A 100 155 CRYSTAL STRUCTURE OF TRNA (UM34/CM34) METHYLTRANSFERASE TRML FROM ESCHERICHIA COLI
4 0.91 22.2 14.1 0.73 153 1 76 91 1j85:A 91 156 STRUCTURE OF YIBK FROM HAEMOPHILUS INFLUENZAE (HI0766), A TRUNCATED SEQUENCE HOMOLOG OF TRNA (GUANOSINE-2'-O-) METHYLTRANSFERASE (SPOU)
5 0.90 22.2 14.1 0.77 153 1 76 91 1mxi:A 91 157 STRUCTURE OF YIBK FROM HAEMOPHILUS INFLUENZAE (HI0766): A METHYLTRANSFERASE WITH A COFACTOR BOUND AT A SITE FORMED BY A KNOT
6 0.85 19.5 13.1 0.86 150 2 99 82 4jal:A 82 157 CRYSTAL STRUCTURE OF TRNA (UM34/CM34) METHYLTRANSFERASE TRML FROM ESCHERICHIA COLI WITH SAH
7 0.85 19.5 13.1 0.83 149 2 99 82 4jal:B 82 156 CRYSTAL STRUCTURE OF TRNA (UM34/CM34) METHYLTRANSFERASE TRML FROM ESCHERICHIA COLI WITH SAH
8 0.83 18.6 12.8 0.85 150 2 82 82 3n4j:A 82 161 PUTATIVE RNA METHYLTRANSFERASE FROM YERSINIA PESTIS
9 0.83 17.9 12.6 0.94 146 1 56 82 4kgn:D 82 150 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
10 0.82 17.1 12.3 0.95 145 2 57 82 4kgn:G 82 149 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
11 0.81 18.5 12.8 0.89 149 2 82 82 3n4k:B 82 161 PUTATIVE RNA METHYLTRANSFERASE FROM YERSINIA PESTIS IN COMPLEX WITH S- ADENOSYL-L-HOMOCYSTEINE.
12 0.81 17.6 12.5 1.08 149 2 56 82 4kgn:H 75 156 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
13 0.80 17.0 12.3 1.13 149 2 56 82 3e5y:A 75 156 CRYSTAL STRUCTURE OF TRMH FAMILY RNA METHYLTRANSFERASE FROM BURKHOLDERIA PSEUDOMALLEI
14 0.80 17.2 12.3 1.03 151 2 81 82 3n4k:A 75 164 PUTATIVE RNA METHYLTRANSFERASE FROM YERSINIA PESTIS IN COMPLEX WITH S- ADENOSYL-L-HOMOCYSTEINE.
15 0.80 18.5 12.8 1.02 147 2 56 82 4kgn:B 75 156 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
16 0.79 18.8 12.9 1.02 147 2 56 82 4kgn:F 75 158 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
17 0.79 18.7 12.9 0.96 138 2 55 82 3e5y:B 90 141 CRYSTAL STRUCTURE OF TRMH FAMILY RNA METHYLTRANSFERASE FROM BURKHOLDERIA PSEUDOMALLEI
18 0.78 17.0 12.3 1.10 148 3 57 82 4kgn:C 75 158 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
19 0.77 18.3 12.7 0.91 144 4 57 82 4kgn:E 75 157 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
20 0.77 19.8 13.2 0.94 136 2 56 82 4kgn:A 90 140 CRYSTAL STRUCTURE OF A TRNA (CYTIDINE(34)-2'-O)-METHYLTRANSFERASE BOUND TO S-ADENOSYL HOMOCYSTEINE
Examined 96131 entries, (248204 chains).  Displaying Matches 1-20 of 33.
  Sort by       arrange by SCOP family  

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PDBe Fold v2.56. 12 Nov 2013