Structure Alignment Results.  help
Query: pdb entry 4oo6:A , 836 residues

CRYSTAL STRUCTURE OF HUMAN KAP-BETA2 BOUND TO THE NLS OF HCC1 (HEPATO CELLULAR CARCINOMA PROTEIN 1)


Examined 96131 entries, (248204 chains).  Displaying Matches 1-19 of 19.
Sort by       arrange by SCOP family  

 ##   Scoring  help RMSD Nalign Ng %seq Query Target (PDB entry)
Q P Z %sse Match %sse Nres × Title
1 1.00 307.4 53.1 0.00 836 0 100 100 4oo6:A 100 836 CRYSTAL STRUCTURE OF HUMAN KAP-BETA2 BOUND TO THE NLS OF HCC1 (HEPATO CELLULAR CARCINOMA PROTEIN 1)
2 0.68 47.8 21.3 1.82 805 11 93 86 2qmr:A 88 835 KARYOPHERIN BETA2/TRANSPORTIN
3 0.66 35.4 19.4 2.00 814 11 99 82 4fq3:A 89 834 CRYSTAL STRUCTURE OF TRANSPORTIN/FUS-NLS
4 0.65 44.6 20.6 2.06 819 7 99 92 4jlq:A 92 840 CRYSTAL STRUCTURE OF HUMAN KARYOPHERIN-BETA2 BOUND TO THE PY-NLS OF SACCHAROMYCES CEREVISIAE NAB2
5 0.64 42.9 20.4 1.99 803 11 93 86 2qmr:D 88 835 KARYOPHERIN BETA2/TRANSPORTIN
6 0.64 45.2 20.7 2.05 813 10 98 92 4h1k:A 92 840 CRYSTAL STRUCTURE OF HUMAN KAP-BETA2 BOUND TO THE NLS OF SACCHAROMYCES CEREVISIAE NAB2
7 0.61 34.5 18.5 2.15 805 12 95 88 2z5o:A 94 834 COMPLEX OF TRANSPORTIN 1 WITH JKTBP NLS
8 0.58 37.9 19.6 2.14 778 17 97 94 2ot8:A 92 824 KARYOPHERIN BETA2/TRANSPORTIN-HNRNPM NLS COMPLEX
9 0.57 38.3 19.5 2.27 793 15 93 88 4fdd:A 85 836 CRYSTAL STRUCTURE OF KAP BETA2-PY-NLS
10 0.57 38.1 19.7 2.02 761 20 88 88 2z5m:A 87 840 COMPLEX OF TRANSPORTIN 1 WITH TAP NLS, CRYSTAL FORM 2
11 0.55 37.5 20.1 2.07 752 20 89 90 2h4m:A 88 827 KARYOPHERIN BETA2/TRANSPORTIN-M9NLS
12 0.51 18.0 15.0 2.56 785 26 90 88 2z5j:A 92 835 FREE TRANSPORTIN 1
13 0.49 24.2 16.5 2.30 736 21 93 88 2z5n:A 92 840 COMPLEX OF TRANSPORTIN 1 WITH HNRNP D NLS
14 0.49 17.8 15.4 2.45 736 28 87 80 2qmr:B 80 801 KARYOPHERIN BETA2/TRANSPORTIN
15 0.48 17.8 15.1 2.57 756 28 85 84 2qmr:C 83 824 KARYOPHERIN BETA2/TRANSPORTIN
16 0.47 32.9 18.8 2.29 719 18 91 88 2z5k:A 92 840 COMPLEX OF TRANSPORTIN 1 WITH TAP NLS
17 0.42 27.4 17.0 2.60 710 28 90 92 2ot8:B 90 813 KARYOPHERIN BETA2/TRANSPORTIN-HNRNPM NLS COMPLEX
18 0.42 25.0 17.2 2.39 678 25 88 84 2h4m:B 88 810 KARYOPHERIN BETA2/TRANSPORTIN-M9NLS
19 0.16 -0.0 4.5 3.99 568 39 57 71 1qbk:B 72 880 STRUCTURE OF THE KARYOPHERIN BETA2-RAN GPPNHP NUCLEAR TRANSPORT COMPLEX
Examined 96131 entries, (248204 chains).  Displaying Matches 1-19 of 19.
Sort by       arrange by SCOP family  


DOWNLOAD:
Summary of all results as a plain text file   
All results as XML file
 
FOR ALL CHECKED MATCHES
Download target sequences (FASTA format)
Download aligned sequences (FASTA format)
Submit for Multiple Alignment    include query
Bring on top of results
Uncheck all
Check all
 

 

 DOWNLOAD  in match range from     to    :
Target sequences (FASTA format)
Aligned sequences (FASTA format)
PDBe Fold v2.56. 12 Nov 2013