MultiFit Webserver

MultiFit: Fitting of multiple proteins into their assembly density map

MultiFit is a computational method for simultaneously fitting atomic structures of components into their assembly density map at resolutions as low as 25 Å. The component positions and orientations are optimized with respect to a scoring function that includes the quality-of-fit of components in the map, the protrusion of components from the map envelope, as well as the shape complementarity between pairs of components. The scoring function is optimized by an exact inference optimizer DOMINO that efficiently finds the global minimum in a discrete sampling space.
 

General information

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Complex EM density map information

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Complex information

Select symmetry mode help

Cyclic Symmetry Mode

Subunit pdb coordinate file help
Symmetry order help

Non-Symmetry Mode

Non-symmetry mode is currently under maintenance. Thank you.

 


BioInfo3D Servers for protein structure analysis and modeling.
  EMDB Database for electron microscopy density maps.


E. Tjioe, K. Lasker, B. Webb, H. Wolfson and A. Sali, Nucleic Acids Research, (2011) 39, W167-W170  PDF

K. Lasker, M. Topf, A. Sali and H. Wolfson, Journal of Molecular Biology, (2009) 388, 180-194  PDF