University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 119629965
Original Database ID EN ENSP00000381408.1
Organism Homo sapiens
Annotation ubiquitin associated and sh3 domain
containing, a, isoform cra_a
Sequence Length 526

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region76-224
Protein Length526
Template PDB Code1vgjA
Template Region5-154
Sequence Identity15%
E-Value0
GA3410.87
MPQS0.47317
z-DOPE-0.11
TSVMod MethodMSALL
TSVMod RMSD6.083
TSVMod NO350.556
Datasethuman_2010_A1
ModPipe VersionSVN.r1188:1193
Model Date2010-11-02

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1vgjcrystal structure of 2'-5' rna ligase from pyrococcus horikoshii
DBALI1vgjA 
JenaImageLibrary1vgj 
Target Sequence
UniProtKBG5E9E4SubName: Full=Ubiquitin associated and SH3 domain containing, A, isoform CRA_a;SubName: Full=Ubiquitin-associated and SH3 domain-containing protein A;
InterProG5E9E4 
PFAMG5E9E4 
ProdomG5E9E4 
GenPept119629965ubiquitin associated and SH3 domain containing, A, isoform CRA_a
GenBankEAX09560.1 ubiquitin associated and SH3 domain containing, A, isoform CRA_a [Homo sapiens]
ENSEMBLENSP00000381408