University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P54829
Original Database ID sp P54829
Organism Homo sapiens
Annotation recname: full=tyrosine-protein
phosphatase non-receptor type
5;ec=3.1.3.48;altna me: full=striatum-enriched
protein-tyrosine phosphatase;short=step;al
...
Sequence Length 565

Dataset Information:

Only Template based calculation have been performed for this sequence. Template based calculations don't use all available PDB structures. To ensure that the most optimal template is used for this sequence, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region403-559
Protein Length565
Template PDB Code1rxdA
Template Region10-155
Sequence Identity18%
E-Value0
GA3410.3
MPQS0.382176
z-DOPE-0.1
TSVMod MethodMTALL
TSVMod RMSD11.958
TSVMod NO350.083
DatasetTB_1rxdA_20091007-38514
ModPipe VersionSVN.r1278
Model Date2010-11-02

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1rxdcrystal structure of human protein tyrosine phosphatase 4a1
DBALI1rxdA 
CATH3.90.190.10 Domain: 1rxdA00 Protein tyrosine phosphatase superfamily (96%)
JenaImageLibrary1rxd 
Target Sequence
UniProtKBP54829RecName: Full=Tyrosine-protein phosphatase non-receptor type 5;EC=3.1.3.48;AltName: Full=Striatum-enriched protein-tyrosine phosphatase;Short=STEP;AltName: Full=Neural-specific protein-tyrosine phosph
InterProP54829 
PFAMP54829 
ProdomP54829 
UniProtKBP54829.3PTN5_HUMAN RecName: Full=Tyrosine-protein phosphatase non-receptor type 5; AltName: Full=Neural-specific protein-tyrosine phosphatase; AltName: Full=Striatum-enriched protein-tyrosine phosphatase; Sho
InterProP54829.3 
PFAMP54829.3 
ProdomP54829.3 
UniProtKBQ6P1Z2RecName: Full=Tyrosine-protein phosphatase non-receptor type 5;EC=3.1.3.48;AltName: Full=Striatum-enriched protein-tyrosine phosphatase;Short=STEP;AltName: Full=Neural-specific protein-tyrosine phosph
InterProQ6P1Z2 
PFAMQ6P1Z2 
ProdomQ6P1Z2 
UniProtKBQ8N2A1RecName: Full=Tyrosine-protein phosphatase non-receptor type 5;EC=3.1.3.48;AltName: Full=Striatum-enriched protein-tyrosine phosphatase;Short=STEP;AltName: Full=Neural-specific protein-tyrosine phosph
InterProQ8N2A1 
PFAMQ8N2A1 
ProdomQ8N2A1 
UniProtKBQ8NDP8RecName: Full=Tyrosine-protein phosphatase non-receptor type 5;EC=3.1.3.48;AltName: Full=Striatum-enriched protein-tyrosine phosphatase;Short=STEP;AltName: Full=Neural-specific protein-tyrosine phosph
InterProQ8NDP8 
PFAMQ8NDP8 
ProdomQ8NDP8 
GenPept223590258PTN5_HUMAN RecName: Full=Tyrosine-protein phosphatase non-receptor type 5; AltName: Full=Neural-specific protein-tyrosine phosphatase; AltName: Full=Striatum-enriched protein-tyrosine phosphatase; Sho