University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 1212992
Original Database ID IP IPI00455173.2
Organism Homo sapiens
Annotation titin
Sequence Length 26926

Dataset Information:

The newest dataset for this sequence was created on 2005-03-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region4619-4878
Protein Length26926
Template PDB Code1itbB
Template Region7-290
Sequence Identity15%
E-Value4e-23
GA3410.68
Datasetsnp-human2
ModPipe VersionModPipe1.0
Model Date2005-03-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1itbtype-1 interleukin-1 receptor complexed with interleukin-1 beta ; PFAM: PF00340 ; SCOP: 21720 21721 21722
DBALI1itbB 
CATH2.60.40.10 Domain: 1itbB01 Immunoglobulins (99%)
CATH2.60.40.10 Domain: 1itbB02 Immunoglobulins (100%)
CATH2.60.40.10 Domain: 1itbB03 Immunoglobulins (78%)
JenaImageLibrary1itb 
Target Sequence
UniProtKBQ10466Titin, heart isoform N2-B (EC 2.7.1.-) (Connectin)
InterProQ10466 
PFAMQ10466 
ProdomQ10466 
UniProtKBQ4U1Z6Titin protein
InterProQ4U1Z6 
PFAMQ4U1Z6 
ProdomQ4U1Z6 
GenPept1212992titin
GenPept4507721 titin [Homo sapiens]
EMBLCAA62188.1 
UCSCGenomeBrowserQ10466 
IPIIPI00455173 
IPIIPI00455173.2