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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P04629
Original Database ID SN P04629_chr1:15364380
Organism Homo sapiens
Annotation high affinity nerve growth factor
receptor precursor (ec 2.7.10.1)de
(neurotro phic tyrosine kinase
receptor type 1) (trk1 transformingde
tyrosine ...
Sequence Length 796

Dataset Information:

The newest dataset for this sequence was created on 2006-06-16. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

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  Template
PDB Code		 PDB
Segment		 PDB Comment CATH
coverage
or Link		 Dataset Seq
Ident		 E-value Model
Score		 Quality Modeled Segment
1xkuA(25-212)crystal structure of the dimeric protein core of decorin, the archetypal small leucine-rich repeat proteoglycan3.80.10.10snp-human4219e-050.23
1ziwA(535-663)human toll-like receptor 3 extracellular domain structureCATHsnp-human4221e-090.59
1ogqA(43-202)the crystal structure of pgip (polygalacturonase inhibiting protein), a leucine rich repeat protein involved in plant defense3.80.10.10snp-human4172e-070.25
1xwdC(64-218)crystal structure of human follicle stimulating hormone complexed with its receptorCATHsnp-human4173e-060.55
1l6zA(27-203)crystal structure of murine ceacam1a[1,4]: a coronavirus receptor and cell adhesion molecule in the cea family2.60.40.10snp-human4167e-060.55
1olzA(394-615)the ligand-binding face of the semaphorins revealed by the high resolution crystal structure of sema4d3.30.1680.10
2.60.40.10		snp-human4116e-050.01
1gsmA(4-201)a reassessment of the madcam-1 structure and its role in integrin recognition.2.60.40.10snp-human4162e-130.53
1n26A(7-216)crystal structure of the extra-cellular domains of human interleukin-6 receptor alpha chain2.60.40.10snp-human4120.00020.21
1ev2E(158-355)crystal structure of fgf2 in complex with the extracellular ligand binding domain of fgf receptor 2 (fgfr2)2.60.40.10snp-human4183e-140.86
1f3rB(5-257)complex between fv antibody fragment and an analogue of the main immunogenic region of the acetylcholine receptor2.60.40.10snp-human4140.0090.47
1k9aA(29-447)crystal structure analysis of full-length carboxyl-terminal src kinase at 2.5 a resolution2.30.30.40
3.30.505.10
3.30.200.20
1.10.510.10		snp-human4273e-771
1p4oA(950-1245)structure of apo unactivated igf-1r kinase domain at 1.5a resolution.3.30.200.20
1.10.510.10		snp-human4392e-901

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Target Sequence
UniProtKBP04629High affinity nerve growth factor receptor precursor (EC 2.7.10.1)DE (Neurotrophic tyrosine kinase receptor type 1) (TRK1 transformingDE tyrosine kinase protein) (p140-TrkA) (Trk-A)
InterProP04629 
PFAMP04629 
ProdomP04629 
GenPept2851601TRKA_HUMAN HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR PRECURSOR (TRK1 TRANSFORMING TYROSINE KINASE PROTEIN) (P140-TRKA)
UCSCGenomeBrowserP04629