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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 62088076
Original Database ID GI 62088076
Organism Homo sapiens
Annotation acid phosphatase 6, lysophosphatidic
variant, partial
Sequence Length 313

Dataset Information:

The newest dataset for this sequence was created on 2013-06-24. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region91-250
Protein Length313
Template PDB Code1rpaA
Template Region2-129
Sequence Identity37%
E-Value6.9e-8
GA3410.96
MPQS0.441182
z-DOPE0.9
TSVMod MethodMSALL
TSVMod RMSD9.16
TSVMod NO350.326
DatasetEFI_update-20130509-01-1235
ModPipe VersionSVN.r1409M
Model Date2013-06-24

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1rpathree-dimensional structure of rat acid phosphatase in complex with l(+) tartrate ; EC: 3.1.3.2 ; PFAM: PF00328 ; SCOP: 33983
DBALI1rpaA 
CATH3.40.50.1240 Domain: 1rpaA00 Phosphoglycerate mutase-like (37%)
JenaImageLibrary1rpa 
Target Sequence
UniProtKBQ59G61Acid phosphatase 6, lysophosphatidic variant (Fragment)
InterProQ59G61 
PFAMQ59G61 
ProdomQ59G61 
GenPept62088076acid phosphatase 6, lysophosphatidic variant, partial