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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q330K1
Original Database ID REF NP_001316488.1
Organism Pan troglodytes, Homo sapiens
Annotation subname: full=mitochondrial import
inner membrane translocase subunit
tim50;subn ame: full=tim50l;subname:
full=timm50 protein;
Sequence Length 240

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region12-200
Protein Length240
Template PDB Code4qqfA
Template Region170-357
Sequence Identity40%
E-Value0
GA3411
MPQS1.3271
z-DOPE-0.59
TSVMod MethodMSALL
TSVMod RMSD2.843
TSVMod NO350.837
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4qqf
DBALI4qqfA 
JenaImageLibrary4qqf 
Target Sequence
SFLD111309241Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBQ330K1SubName: Full=Mitochondrial import inner membrane translocase subunit TIM50;SubName: Full=TIM50L;SubName: Full=TIMM50 protein;
InterProQ330K1 
PFAMQ330K1 
ProdomQ330K1 
UniProtKBQ330K1SubName: Full=Mitochondrial import inner membrane translocase subunit TIM50;SubName: Full=TIM50L;SubName: Full=TIMM50 protein;
InterProQ330K1 
PFAMQ330K1 
ProdomQ330K1 
RefSeqXP_024782581.1mitochondrial import inner membrane translocase subunit TIM50 isoform X2
RefSeqXP_024207109.1mitochondrial import inner membrane translocase subunit TIM50 isoform X3
RefSeqXP_001138345.1 PREDICTED: translocase of inner mitochondrial membrane 50 homolog isoform 2 [Pan troglodytes]
RefSeqXP_030860106.1mitochondrial import inner membrane translocase subunit TIM50 isoform X2
GenPept649145106TIMM50, partial
GenPept45594397TIM50L
GenPept114677203 PREDICTED: translocase of inner mitochondrial membrane 50 homolog isoform 2 [Pan troglodytes]
GenPept111309241TIMM50 protein
GenBankAAS68537.1 TIM50L [Homo sapiens]
GenBankAAI21147.1 TIMM50 protein [Homo sapiens]
ENSEMBLENSP00000445806