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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A6PVG9
Original Database ID REF XP_005261992.1
Organism Homo sapiens
Annotation recname: full=myotubularin-related
protein 5;altname: full=set-binding
factor 1; short=sbf1;
Sequence Length 1867

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region887-1595
Protein Length1867
Template PDB Code1zsqA
Template Region76-580
Sequence Identity32%
E-Value0
GA3411
MPQS0.287754
z-DOPE0.6
TSVMod MethodMSALL
TSVMod RMSD11.078
TSVMod NO350.544
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB1zsqcrystal structure of mtmr2 in complex with phosphatidylinositol 3-phosphate
DBALI1zsqA 
CATH2.30.29.30 Domain: 1zsqA01 Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) (100%)
JenaImageLibrary1zsq 
Target Sequence
UniProtKBQ9UGB8RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ9UGB8 
PFAMQ9UGB8 
ProdomQ9UGB8 
UniProtKBO60228RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProO60228 
PFAMO60228 
ProdomO60228 
UniProtKBQ5JXD8RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ5JXD8 
PFAMQ5JXD8 
ProdomQ5JXD8 
UniProtKBO95248RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProO95248 
PFAMO95248 
ProdomO95248 
UniProtKBA6PVG9RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProA6PVG9 
PFAMA6PVG9 
ProdomA6PVG9 
UniProtKBQ5PPM2RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ5PPM2 
PFAMQ5PPM2 
ProdomQ5PPM2 
UniProtKBQ96GR9RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ96GR9 
PFAMQ96GR9 
ProdomQ96GR9 
UniProtKBA0A8J8YTQ8SubName: Full=Myotubularin-related protein 5 {ECO:0000313|Ensembl:ENSP00000252027}SubName: Full=SET binding factor 1, isoform CRA_b {ECO:0000313|EMBL:EAW73537.1}
InterProA0A8J8YTQ8 
PFAMA0A8J8YTQ8 
ProdomA0A8J8YTQ8 
UniProtKBQ5JXD8OTTHUMP00000028749
InterProQ5JXD8 
PFAMQ5JXD8 
ProdomQ5JXD8 
UniProtKBQ96GR9RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ96GR9 
PFAMQ96GR9 
ProdomQ96GR9 
UniProtKBQ5JXD8RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ5JXD8 
PFAMQ5JXD8 
ProdomQ5JXD8 
UniProtKBO95248.3MTMR5_HUMAN RecName: Full=Myotubularin-related protein 5; AltName: Full=SET-binding factor 1; Short=Sbf1
InterProO95248.3 
PFAMO95248.3 
ProdomO95248.3 
UniProtKBQ9UGB8RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ9UGB8 
PFAMQ9UGB8 
ProdomQ9UGB8 
UniProtKBQ5PPM2RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProQ5PPM2 
PFAMQ5PPM2 
ProdomQ5PPM2 
UniProtKBO95248RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProO95248 
PFAMO95248 
ProdomO95248 
UniProtKBO60228RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProO60228 
PFAMO60228 
ProdomO60228 
UniProtKBA6PVG9RecName: Full=Myotubularin-related protein 5;AltName: Full=SET-binding factor 1;Short=Sbf1;
InterProA6PVG9 
PFAMA6PVG9 
ProdomA6PVG9 
RefSeqNP_002963.1 SET binding factor 1 isoform a [Homo sapiens]
GenPept158515405MTMR5_HUMAN RecName: Full=Myotubularin-related protein 5; AltName: Full=SET-binding factor 1; Short=Sbf1
GenPept37574612 SET binding factor 1 isoform a [Homo sapiens]
GenPept57208523SET binding factor 1
GenPept119593943SET binding factor 1, isoform CRA_b
GenBankEAW73537.1 SET binding factor 1, isoform CRA_b [Homo sapiens]
ENSEMBLENSP00000336522SET binding factor 1 (Sbf1) (Myotubularin-related protein 5). [Homo sapiens]
EMBLCAI42962.1 
ENSEMBLENSP00000336522 
ENSEMBLENSP00000336522TDI sequence
ENSEMBLENSP00000375097