University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 314883557
Original Database ID TR SFR1_HUMAN
Organism Homo sapiens, Mus musculus
Annotation sequence 3799 from patent us 7842467
Sequence Length 247

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region13-197
Protein Length247
Template PDB Code1qm9A
Template Region2-197
Sequence Identity20%
E-Value5e-20
GA3411
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1qm9nmr, representative structure ; PFAM: PF00076 ; SCOP: 39207 39208
DBALI1qm9A 
CATH3.30.70.330 Domain: 1qm9A01 Alpha-Beta Plaits (99%)
CATH3.30.70.330 Domain: 1qm9A02 Alpha-Beta Plaits (99%)
JenaImageLibrary1qm9 
Target Sequence
UniProtKBQ07955Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing factor SF2,DE P33 subunit) (Alternative splicing factor ASF-1)
InterProQ07955 
PFAMQ07955 
ProdomQ07955 
UniProtKBQ6PDM2Splicing factor, arginine/serine-rich 1
InterProQ6PDM2 
PFAMQ6PDM2 
ProdomQ6PDM2 
GenPept314883557Sequence 3799 from patent US 7842467
UCSCGenomeBrowserQ07955