University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O43370
Original Database ID EN ENSP00000283921.4
Organism Homo sapiens
Annotation recname: full=homeobox protein
hox-a10;altname: full=homeobox
protein hox-1.8;al tname: full=homeobox
protein hox-1h;altname: full=pl;
Sequence Length 410

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region327-397
Protein Length410
Template PDB Code1pufA
Template Region196-266
Sequence Identity79%
E-Value0
GA3411
MPQS1.15597
z-DOPE-1.04
TSVMod MethodMTALL
TSVMod RMSD4.298
TSVMod NO350.849
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1pufcrystal structure of hoxa9 and pbx1 homeodomains bound to dna ; PFAM: PF00046
DBALI1pufA 
CATH1.10.10.60 Domain: 1pufA00 Homeodomain-like (92%)
JenaImageLibrary1puf 
Target Sequence
UniProtKBQ504T1RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProQ504T1 
PFAMQ504T1 
ProdomQ504T1 
UniProtKBQ15949RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProQ15949 
PFAMQ15949 
ProdomQ15949 
UniProtKBP31260RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProP31260 
PFAMP31260 
ProdomP31260 
UniProtKBO43370RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProO43370 
PFAMO43370 
ProdomO43370 
UniProtKBO43605RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProO43605 
PFAMO43605 
ProdomO43605 
UniProtKBQ504T1RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProQ504T1 
PFAMQ504T1 
ProdomQ504T1 
UniProtKBQ15949RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProQ15949 
PFAMQ15949 
ProdomQ15949 
UniProtKBP31260.3HXA10_HUMAN RecName: Full=Homeobox protein Hox-A10; AltName: Full=Homeobox protein Hox-1.8; AltName: Full=Homeobox protein Hox-1H; AltName: Full=PL
InterProP31260.3 
PFAMP31260.3 
ProdomP31260.3 
UniProtKBP31260RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProP31260 
PFAMP31260 
ProdomP31260 
UniProtKBO43605RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProO43605 
PFAMO43605 
ProdomO43605 
UniProtKBO43370RecName: Full=Homeobox protein Hox-A10;AltName: Full=Homeobox protein Hox-1.8;AltName: Full=Homeobox protein Hox-1H;AltName: Full=PL;
InterProO43370 
PFAMO43370 
ProdomO43370 
RefSeqNP_061824.3 homeobox protein Hox-A10 isoform a [Homo sapiens]
GenPept294862509HXA10_HUMAN RecName: Full=Homeobox protein Hox-A10; AltName: Full=Homeobox protein Hox-1.8; AltName: Full=Homeobox protein Hox-1H; AltName: Full=PL
GenPept182765442 homeobox protein Hox-A10 isoform a [Homo sapiens]
GenPept15300314 homeo box A10 [Homo sapiens]
GenPept119614290homeobox A10, isoform CRA_b
GenBankEAW93884.1 homeobox A10, isoform CRA_b [Homo sapiens]
ENSEMBLENSP00000283921