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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link O43370
Original Database ID EN GENSCAN00000044118
Organism Homo sapiens, synthetic construct
Annotation recname: full=homeobox protein
hox-a10;altname: full=hox-1h;altname:
full=hox-1. 8;altname: full=pl;
Sequence Length 393

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region21-87
Protein Length393
Template PDB Code3bogC
Template Region3-79
Sequence Identity73%
E-Value0.00032
GA3410.15
MPQS-0.0607165
z-DOPE1.56
TSVMod MethodMSALL
TSVMod RMSD13.718
TSVMod NO350.05
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3bogsnow flea antifreeze protein quasi-racemate
DBALI3bogC 
JenaImageLibrary3bog 
Target Sequence
UniProtKBQ15949RecName: Full=Homeobox protein Hox-A10;AltName: Full=Hox-1H;AltName: Full=Hox-1.8;AltName: Full=PL;
InterProQ15949 
PFAMQ15949 
ProdomQ15949 
UniProtKBP31260.2HXA10_HUMAN RecName: Full=Homeobox protein Hox-A10; AltName: Full=Hox-1H; AltName: Full=Hox-1.8; AltName: Full=PL
InterProP31260.2 
PFAMP31260.2 
ProdomP31260.2 
UniProtKBP31260RecName: Full=Homeobox protein Hox-A10;AltName: Full=Hox-1H;AltName: Full=Hox-1.8;AltName: Full=PL;
InterProP31260 
PFAMP31260 
ProdomP31260 
UniProtKBO43605RecName: Full=Homeobox protein Hox-A10;AltName: Full=Hox-1H;AltName: Full=Hox-1.8;AltName: Full=PL;
InterProO43605 
PFAMO43605 
ProdomO43605 
UniProtKBO43370RecName: Full=Homeobox protein Hox-A10;AltName: Full=Hox-1H;AltName: Full=Hox-1.8;AltName: Full=PL;
InterProO43370 
PFAMO43370 
ProdomO43370 
RefSeqNP_061824.2 homeobox A10 isoform a [Homo sapiens]
GenPept123982006homeobox A10
GenPept915102904Sequence 150 from patent US 8945849
GenPept348082881Sequence 329 from patent US 8026065
GenPept2789672homeobox protein A10
GenPept123996833homeobox A10, partial
GenPept24497549 homeobox A10 isoform a [Homo sapiens]
GenPept124000653homeobox A10, partial
GenPept13124743HXA10_HUMAN RecName: Full=Homeobox protein Hox-A10; AltName: Full=Hox-1H; AltName: Full=Hox-1.8; AltName: Full=PL
GenPept15559235Homeobox A10
GenPept208968489homeobox A10, partial
GenBankAAH13971.1 Homeobox A10 [Homo sapiens]
GenBankABM87835.1 homeobox A10 [synthetic construct]
GenBankABM86018.1 homeobox A10 [synthetic construct]
GenBankABM82832.1 homeobox A10 [synthetic construct]
GenBankAAB96917.1 homeobox protein A10 [Homo sapiens]
ENSEMBLENSP00000283921Homeobox protein Hox-A10 (Hox-1H) (Hox-1.8) (PL). [Homo sapiens]
UCSCGenomeBrowserP31260 
ENSEMBLENSP00000283921 
ENSEMBLENSP00000283921TDI sequence
ENSEMBLGENSCAN00000015107