University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 31879637
Original Database ID UP P35612
Organism Homo sapiens
Annotation af486420_1 beta adducin 2 transcript
variant beta-4a, partial
Sequence Length 587

Dataset Information:

The newest dataset for this sequence was created on 2010-11-02. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region123-376
Protein Length587
Template PDB Code2z7bA
Template Region-2-232
Sequence Identity20%
E-Value0
GA3411
MPQS0.412309
z-DOPE-0.22
TSVMod MethodMSALL
TSVMod RMSD5.068
TSVMod NO350.659
Datasethuman_2010_A1
ModPipe VersionSVN.r1188:1193
Model Date2010-11-02

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB2z7bcrystal structure of mesorhizobium loti 3-hydroxy-2-methylpyridine-4,5-dicarboxylate decarboxylase
DBALI2z7bA 
JenaImageLibrary2z7b 
Target Sequence
UniProtKBQ7Z691Beta adducin 2 transcript variant beta-4a (Fragment)
InterProQ7Z691 
PFAMQ7Z691 
ProdomQ7Z691 
GenPept31879637AF486420_1 beta adducin 2 transcript variant beta-4a, partial
GenBankAAP71863.1AF486420_1 beta adducin 2 transcript variant beta-4a [Homo sapiens]
UCSCGenomeBrowserQ7Z691