University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q9BUL2
Original Database ID GI 31417934
Organism Homo sapiens
Annotation subname: full=pnkp protein;
Sequence Length 482

Dataset Information:

The newest dataset for this sequence was created on 2013-02-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region107-482
Protein Length482
Template PDB Code3zvlA
Template Region145-522
Sequence Identity84%
E-Value0
GA3411
MPQS1.83458
z-DOPE-1.2
TSVMod MethodMSALL
TSVMod RMSD1.485
TSVMod NO350.951
DatasetHAD
ModPipe VersionSVN.r1409M
Model Date2013-02-24

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3zvl
DBALI3zvlA 
JenaImageLibrary3zvl 
Target Sequence
SFLD31417934Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBQ9BUL2SubName: Full=PNKP protein;
InterProQ9BUL2 
PFAMQ9BUL2 
ProdomQ9BUL2 
UniProtKBQ9BUL2SubName: Full=PNKP protein;
InterProQ9BUL2 
PFAMQ9BUL2 
ProdomQ9BUL2 
GenPept14786918 polynucleotide kinase 3'-phosphatase [Homo sapiens]
GenPept31417934PNKP protein
GenPept649139213PNKP, partial
GenBankAAH02519.2 PNKP protein [Homo sapiens]