University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 15214721
Original Database ID GI 15214721
Organism Homo sapiens
Annotation haloacid dehalogenase-like hydrolase
domain containing 1a
Sequence Length 214

Dataset Information:

The newest dataset for this sequence was created on 2013-02-24. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-214
Protein Length214
Template PDB Code3l5kA
Template Region15-228
Sequence Identity100%
E-Value0
GA3411
MPQS2.2064
z-DOPE-1.16
TSVMod MethodMSALL
TSVMod RMSD0.758
TSVMod NO351
DatasetHAD
ModPipe VersionSVN.r1409M
Model Date2013-02-24

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3l5kthe crystal structure of human haloacid dehalogenase-like hydrolase domain containing 1a (hdhd1a)
DBALI3l5kA 
JenaImageLibrary3l5k 
Target Sequence
SFLD15214721Structure Function Linkage Database entry: Member of the Haloacid dehalogenase superfamily.
UniProtKBQ96EB8DNA segment, numerous copies, expressed probes (GS1 gene)
InterProQ96EB8 
PFAMQ96EB8 
ProdomQ96EB8 
GenPept15214721Haloacid dehalogenase-like hydrolase domain containing 1A
GenPept649137678HDHD1, partial
GenBankAAH12494.1 Haloacid dehalogenase-like hydrolase domain containing 1A [Homo sapiens]