University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q86XW8
Original Database ID REF XP_016878248.1
Organism Homo sapiens
Annotation hisppd2a protein.
Sequence Length 817

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region53-371
Protein Length817
Template PDB Code3t7aA
Template Region42-360
Sequence Identity86%
E-Value0
GA3411
MPQS1.46895
z-DOPE-1.25
TSVMod MethodMSALL
TSVMod RMSD0.837
TSVMod NO350.952
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB3t7a
DBALI3t7aA 
JenaImageLibrary3t7a 
Target Sequence
UniProtKBQ86XW8HISPPD2A protein.
InterProQ86XW8 
PFAMQ86XW8 
ProdomQ86XW8 
GenPept29571110HISPPD2A protein
GenPept649138301PPIP5K1, partial
GenBankAAH50263.1 HISPPD2A protein [Homo sapiens]
UCSCGenomeBrowserQ86XW8