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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A4D1K5
Original Database ID human smo
Organism Homo sapiens, synthetic construct
Annotation subname: full=smoothened homolog
(drosophila);
Sequence Length 787

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region58-558
Protein Length787
Template PDB Code5v57A
Template Region58-558
Sequence Identity99%
E-Value0
GA3411
MPQS1.53899
z-DOPE-0.93
TSVMod MethodMSALL
TSVMod RMSD3.107
TSVMod NO350.904
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB5v57
DBALI5v57A 
JenaImageLibrary5v57 
Target Sequence
UniProtKBQ99835RecName: Full=Smoothened homolog;Short=SMO;AltName: Full=Protein Gx;Flags: Precursor;
InterProQ99835 
PFAMQ99835 
ProdomQ99835 
UniProtKBA4D1K5SubName: Full=Smoothened homolog (Drosophila);
InterProA4D1K5 
PFAMA4D1K5 
ProdomA4D1K5 
UniProtKBA4D1K5SubName: Full=Smoothened homolog (Drosophila);
InterProA4D1K5 
PFAMA4D1K5 
ProdomA4D1K5 
UniProtKBQ99835.1SMO_HUMAN RecName: Full=Smoothened homolog; Short=SMO; AltName: Full=Protein Gx; Flags: Precursor
InterProQ99835.1 
PFAMQ99835.1 
ProdomQ99835.1 
UniProtKBA4D1K5RecName: Full=Smoothened homolog;Short=SMO;AltName: Full=Protein Gx;Flags: Precursor;
InterProA4D1K5 
PFAMA4D1K5 
ProdomA4D1K5 
UniProtKBQ99835RecName: Full=Smoothened homolog;Short=SMO;AltName: Full=Protein Gx;Flags: Precursor;
InterProQ99835 
PFAMQ99835 
ProdomQ99835 
RefSeqNP_005622.1 smoothened homolog precursor [Homo sapiens]
GenPept443746135Sequence 926 from patent US 8338124
GenPept5032099 smoothened homolog precursor [Homo sapiens]
GenPept51094856smoothened homolog (Drosophila)
GenPept532931108Sequence 1 from patent US 8481680
GenPept550861029Sequence 1 from patent US 8546524
GenPept6226142SMO_HUMAN RecName: Full=Smoothened homolog; Short=SMO; AltName: Full=Protein Gx; Flags: Precursor
GenPept915740698Sequence 746 from patent US 8999654
GenPept396990159Sequence 1 from patent US 8198402
GenPept6940763Gx protein
GenPept4324955smoothened
GenPept3265148Gx protein
GenPept124000275smoothened homolog (Drosophila), partial
GenPept13642461 smoothened (Drosophila) homolog [Homo sapiens]
GenPept119604121smoothened homolog (Drosophila)
GenPept10062732Sequence 4 from patent US 5990281
GenPept14477975Sequence 4 from patent US 6136958
GenPept14603016Smoothened homolog (Drosophila)
GenPept14744175 smoothened (Drosophila) homolog [Homo sapiens]
GenPept15299037 smoothened (Drosophila) homolog [Homo sapiens]
GenPept1813876smoothened
GenPept23312287Sequence 4 from patent US 6407216
GenPept284897750Sequence 926 from patent US 7638288
GenPept29693695Sequence 4 from patent US 6492139
GenPept306921359smoothened homolog, partial
GenPept314264552Sequence 98 from patent US 7763425
GenBankEAW83715.1 smoothened homolog (Drosophila) [Homo sapiens]
GenBankEAL24102.1 smoothened homolog (Drosophila) [Homo sapiens]
GenBankABM87646.1 smoothened homolog (Drosophila) [synthetic construct]
GenBankAAH09989.1 Smoothened homolog (Drosophila) [Homo sapiens]
GenBankAAF31757.1 Gx protein [Homo sapiens]
GenBankAAC24863.1 Gx protein [Homo sapiens]
GenBankAAB41788.1 smoothened [Homo sapiens]
GenBankAAD17202.1 smoothened [Homo sapiens]
ENSEMBLENSP00000249373Smoothened homolog precursor (SMO) (Gx protein). [Homo sapiens]
UCSCGenomeBrowserQ99835 
ENSEMBLENSP00000249373 
ENSEMBLENSP00000249373TDI sequence
ENSEMBLGENSCAN00000044006 
ENSEMBLENSP00000249373