University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link 3355458
Original Database ID TR O75255
Organism Homo sapiens
Annotation ptpsigma, partial cds, partial
Sequence Length 475

Dataset Information:

The newest dataset for this sequence was created on 2004-10-12. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region15-193
Protein Length475
Template PDB Code1uctA
Template Region14-194
Sequence Identity14%
E-Value8e-20
GA3410.48
DatasetSP/TR-2004
ModPipe VersionModPipe1.0
Model Date2004-10-12

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1uctcrystal structure of the extracellular fragment of fc alpha receptor i (cd89) ; PFAM: PF00047
DBALI1uctA 
CATH2.60.40.10 Domain: 1uctA01 Immunoglobulins (91%)
CATH2.60.40.10 Domain: 1uctA02 Immunoglobulins (99%)
JenaImageLibrary1uct 
Target Sequence
UniProtKBO75255PTPsigma, partial CDS (Fragment)
InterProO75255 
PFAMO75255 
ProdomO75255 
GenPept3355458PTPsigma, partial CDS, partial
GenBankAAC27825.1 PTPsigma, partial CDS [Homo sapiens]