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ModBase: Database of Comparative Protein Structure Models

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Sequence
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Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-4264191001K6WA8-426the structure of escherichia
coli cytosine deaminase
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43050-36731881pta40-360three-dimensional structure
of phosphotriesterase:
an enzyme capable of
detoxifying organophosphate
nerve agents
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-410397141p1mA3-378structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43261-365305131bf6A8-289phosphotriesterase homology
protein from escherichia
coli
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4271-405405132oofA3-405the crystal structure
of 4-imidazolone-5-propanoate
amidohydrolase from
environmental sample
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42729-34231481i0dA36-329high resolution structure
of the zinc/cadmium-containing
phosphotriesterase from
pseudomonas diminuta
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
4321-428428141gkrA1-451l-hydantoinase (dihydropyrimidinase)
from arthrobacter aurescens
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli42656-359304131bf6A7-289phosphotriesterase homology
protein from escherichia
coli
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43028-367340141w1iE28-335crystal structure of
dipeptidyl peptidase
iv (dppiv or cd26) in
complex with adenosine
deaminase
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-411404124ubpC71-464structure of bacillus
pasteurii urease inhibited
with acetohydroxamic
acid at 1.55 a resolution
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-4274191001K6WA8-426the structure of escherichia
coli cytosine deaminase
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-410397141kcxA19-453x-ray structure of nysgrc
target t-45
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli42620-363344141krmA21-332crystal structure of
bovine adenosine deaminase
complexed with 6-hydroxyl-1,6-dihydropurine
riboside
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4271-407407141onwA4-384crystal structure of
isoaspartyl dipeptidase
from e. coli
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-410397141nfgA5-434structure of d-hydantoinase
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43252-369318111pta5-316three-dimensional structure
of phosphotriesterase:
an enzyme capable of
detoxifying organophosphate
nerve agents
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli42656-361306111bf6A6-289phosphotriesterase homology
protein from escherichia
coli
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli42652-379328121j79A4-319molecular structure
of dihydroorotase: a
paradigm for catalysis
through the use of a
binuclear metal center
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-406398133be7A8-397crystal structure of
zn-dependent arginine
carboxypeptidase
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42757-341285183ou8A11-299
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43228-369342131a4mA33-332ada structure complexed
with purine riboside
at ph 7.0
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43223-385363251p1mA15-343structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli42622-415394133ubpC87-468diamidophosphate inhibited
bacillus pasteurii urease
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-406398151gkrA6-434l-hydantoinase (dihydropyrimidinase)
from arthrobacter aurescens
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43059-363305131bf6A8-289phosphotriesterase homology
protein from escherichia
coli
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42725-406382141o12A3-361crystal structure of
n-acetylglucosamine-6-phosphate
deacetylase (tm0814)
from thermotoga maritima
at 2.5 a resolution
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42726-412387131e9zB105-463crystal structure of
helicobacter pylori
urease
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-409398151gkrA6-434l-hydantoinase (dihydropyrimidinase)
from arthrobacter aurescens
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-4324191001ra0A8-426bacterial cytosine deaminase
d314g mutant bound to
5-fluoro-4-(s)-hydroxy-3,4-dihydropyrimidine.
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-405397182plmA3-378crystal structure of
the protein tm0936 from
thermotoga maritima
complexed with zn and
s-inosylhomocysteine
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-378370132imrA39-415crystal structure of
hypothetical protein
dr_0824 from deinococcus
radiodurans
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-409398121UN7A7-388
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-410397182plmA3-378crystal structure of
the protein tm0936 from
thermotoga maritima
complexed with zn and
s-inosylhomocysteine
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-404397141p1mA3-378structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43028-367340131ndwA28-335crystal structure of
adenosine deaminase
complexed with fr221647
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42757-360304131bf6A7-289phosphotriesterase homology
protein from escherichia
coli
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli4302-409408131onxA2-383crystal structure of
isoaspartyl dipeptidase
from escherichia coli
complexed with aspartate
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-406398121o12A3-361crystal structure of
n-acetylglucosamine-6-phosphate
deacetylase (tm0814)
from thermotoga maritima
at 2.5 a resolution
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-4304191001ra0A8-426bacterial cytosine deaminase
d314g mutant bound to
5-fluoro-4-(s)-hydroxy-3,4-dihydropyrimidine.
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-414407131nfgA5-429structure of d-hydantoinase
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-411398133be7A8-397crystal structure of
zn-dependent arginine
carboxypeptidase
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
427279-415137293nqbA255-385crystal structure of
adenine deaminase from
agrobacterium tumefaciens
(str. c 58)
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42726-408383132ogjA42-390crystal structure of
a dihydroorotase
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli4302-415414124ubpC61-464structure of bacillus
pasteurii urease inhibited
with acetohydroxamic
acid at 1.55 a resolution
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4271-416416141ejxC1062-1465crystal structure of
wild-type klebsiella
aerogenes urease at
100k
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43228-410383142oofA32-405the crystal structure
of 4-imidazolone-5-propanoate
amidohydrolase from
environmental sample
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-384371131nfgA5-392structure of d-hydantoinase
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4271-412412121a5nC62-461k217a variant of klebsiella
aerogenes urease, chemically
rescued by formate and
nickel
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-408397161j6pA3-378crystal structure of
metal-dependent hydrolase
of cytosinedemaniase/chlorohydrolase
family (tm0936) from
thermotoga maritima
at 1.9 a resolution
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-411404131ejwC1070-1461crystal structure of
wild-type klebsiella
aerogenes urease at
298k