University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Overview

Go to Sequence Overview
Search Summary
 
Perform Action on Selected Model(s) : 391 matches found.
Previous models [HITS 251-300] Next models
TARGETMODEL DATATEMPLATE
Model
Icon
Model/Fold
Reliability
Sequence
Database
Link
Database AnnotationOrganismProtein
Size
Modeled
Segment
SizeSeq
Id(%)
PDB
code
PDB
Segment
PDB Comment
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-404397161p1mA3-378structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-410397153feqA6-406crystal structure of
uncharacterized protein
eah89906
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-409398101un7A7-388
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-377370132imrA39-415crystal structure of
hypothetical protein
dr_0824 from deinococcus
radiodurans
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42757-362306111bf6A6-289phosphotriesterase homology
protein from escherichia
coli
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-405397141k1dA5-437crystal structure of
d-hydantoinase
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-410403141onwA12-388crystal structure of
isoaspartyl dipeptidase
from e. coli
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-4324191001k70A8-426the structure of escherichia
coli cytosine deaminase
bound to 4-hydroxy-3,4-dihydro-1h-pyrimidin-2-one
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli4302-414413141onwA2-388crystal structure of
isoaspartyl dipeptidase
from e. coli
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-382371131nfgA5-392structure of d-hydantoinase
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
4323-432430134ubpC68-478structure of bacillus
pasteurii urease inhibited
with acetohydroxamic
acid at 1.55 a resolution
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli42622-415394133ubpC87-468diamidophosphate inhibited
bacillus pasteurii urease
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43231-419389152p9bA40-439crystal structure of
putative prolidase from
bifidobacterium longum
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43252-371320101i0bA40-362high resolution structure
of the manganese-containing
phosphotriesterase from
pseudomonas diminuta
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43056-407352141j79A7-345molecular structure
of dihydroorotase: a
paradigm for catalysis
through the use of a
binuclear metal center
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-408397141k1dA5-437crystal structure of
d-hydantoinase
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli4302-414413131onxA2-388crystal structure of
isoaspartyl dipeptidase
from escherichia coli
complexed with aspartate
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42726-412387111e9zB105-463crystal structure of
helicobacter pylori
urease
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4276-412407121un7A4-394
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-4304191001K6WA8-426the structure of escherichia
coli cytosine deaminase
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43050-369320101i0bA40-362high resolution structure
of the manganese-containing
phosphotriesterase from
pseudomonas diminuta
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-410399121ymyA4-381crystal structure of
the n-acetylglucosamine-6-phosphate
deacetylase from escherichia
coli k12
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42723-405383142oofA32-405the crystal structure
of 4-imidazolone-5-propanoate
amidohydrolase from
environmental sample
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-381370132imrA39-415crystal structure of
hypothetical protein
dr_0824 from deinococcus
radiodurans
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42723-425403162oodA38-455crystal structure of
guanine deaminase from
bradyrhizobium japonicum
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42747-364318111pta5-316three-dimensional structure
of phosphotriesterase:
an enzyme capable of
detoxifying organophosphate
nerve agents
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-406399131kcxA19-441x-ray structure of nysgrc
target t-45
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-411404131ejxA1070-1461crystal structure of
wild-type klebsiella
aerogenes urease at
100k
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4264-4264231001k6wA4-426the structure of escherichia
coli cytosine deaminase
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4275-4274231001k6wA4-426the structure of escherichia
coli cytosine deaminase
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-405398121o12A3-361crystal structure of
n-acetylglucosamine-6-phosphate
deacetylase (tm0814)
from thermotoga maritima
at 2.5 a resolution
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43214-412399121ymyA4-381crystal structure of
the n-acetylglucosamine-6-phosphate
deacetylase from escherichia
coli k12
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43210-429420141nfgA1-453structure of d-hydantoinase
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-409398121o12A3-361crystal structure of
n-acetylglucosamine-6-phosphate
deacetylase (tm0814)
from thermotoga maritima
at 2.5 a resolution
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42726-414389152p9bA40-439crystal structure of
putative prolidase from
bifidobacterium longum
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-407399121ymyA4-381crystal structure of
the n-acetylglucosamine-6-phosphate
deacetylase from escherichia
coli k12
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4279-403395183h4uA33-436
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42718-380363251p1mA15-343structure of the hypothetical
protein tm0936 from
thermotoga maritima
at 1.5a bound to ni
and methionine
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43028-378351121krmA25-345crystal structure of
bovine adenosine deaminase
complexed with 6-hydroxyl-1,6-dihydropurine
riboside
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42722-364343121a4mA25-335ada structure complexed
with purine riboside
at ph 7.0
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-404397151nfgA5-434structure of d-hydantoinase
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42756-360305131bf6A8-289phosphotriesterase homology
protein from escherichia
coli
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
42748-34229581pta41-329three-dimensional structure
of phosphotriesterase:
an enzyme capable of
detoxifying organophosphate
nerve agents
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-408397131rk6A12-463the enzyme in complex
with 50mm cdcl2
18655481a chain a, the structure
of escherichia coli cytosine
deaminase
Escherichia coli4268-406399121ymyA4-381crystal structure of
the n-acetylglucosamine-6-phosphate
deacetylase from escherichia
coli k12
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43060-367308121qw7A66-360structure of an engineered
organophosphorous hydrolase
with increased activity
toward hydrolysis of
phosphothiolate bonds
P25524.3coda_ecoli recname: full=cytosine
deaminase; altname: full=cytosine
aminohydrola se
Escherichia coli,
Shigella dysenteriae,
etc.
4271-406406141onxA4-383crystal structure of
isoaspartyl dipeptidase
from escherichia coli
complexed with aspartate
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli4302-415414124ubpC61-464structure of bacillus
pasteurii urease inhibited
with acetohydroxamic
acid at 1.55 a resolution
55669648a chain a, bacterial cytosine
deaminase d314g mutant bound
to 5-fluoro-4-(s)- hy droxy-3,4-dihydropyrimidine
Escherichia coli43012-4304191001K6WA8-426the structure of escherichia
coli cytosine deaminase
D8A054subname: full=cytosine deaminase
{eco:0000313|embl:efk23471.1};ec=3.5.4.1
{eco:0 000313|embl:efk23471.1};
Escherichia coli,
Escherichia coli H386,
etc.
43231-417387121e9yB105-463crystal structure of
helicobacter pylori
urease in complex with
acetohydroxamic acid